Monday, November 14, 2011

DNA Structure and Function/Virus/Bacteria

Tuesday 11/8
Go over all tests
1.) DNA Experiments worksheet with predicted results vs. actual results.
Hershey Chase Experiment, Pneumonia Experiment

Wednesday 11/9
DNA Corrections
1.) Start going through vocabulary.
2.) Replication vocabulary first, protein production second
3.) RNA vs DNA homework chart.

Thursday 11/10
1.) Clean up DNA Models.
2.) Review Protein Structure and Function, DNA Structure and Function.
3.) Vocabulary List: Transcription, Translation,

Friday 11/12
Continue Hershey Chase experiment. Mehlson-Stahl Experiment Explanation.
1.) Finish vocabulary
2.) Replication detail
3.) Transcription detail
4.) Translation detail.
5.) Hershey Chase Experiment Worksheet.
6.) Vocabulary Continue

Monday
-Exon/Intron Hook
1.) Continue Notes on Translation (elongation)-Advance Detail Videos, ppt slides from Chapter 10.10-10.15
2.) Transcription/Translation Utah Genetics for Speed.
3.) Utah Genetics Protein Mutations
4.) Translation Vocabulary

Tuesday (11/15)
View DNA to mRNA to Protein as a system of production.
Vocabulary: Differentiation

Transcriptional Level:
-Histones binding and suppressing DNA
-No polymerase binding to that section of the DNA
-Other suppressor proteins not allowing RNA polymerase to bind to the DNA
-Lick a Rat

mRNA Level:
-Lacking a stabilizer
-Breaks down easily
-Splicing (take out introns leave in introns)

Translational Level:
-Protein being unstable
-Protein needing an extra treatment (adding a phosphate)

1.) Review from memory, transcription draw from memory, translation draw from memory.
2.) Combine with two other people.
3.) Whoever had the least details in their first picture does the oral description.

Wednesday: DNA to protein from memory.
-Whiteboarding: Cold Sore Viruses: How do they work?
-Bacteria and Virus Vocabulary, ppt. images rest of Chapter 10.
-Lytic vs. Lysogenic Vocabulary

Thursday:
Khan Bacteria and Virus Video

Friday:
Khan Academy More Videos

Monday:
1.) Stem Cell Guy
2.) Describe transcription and translation whiteboarding from memory (then pass back papers)
3.) Add a detail you don't think another group will have
4.) Go to book to add any missing details especially from 11.7.2 Summative figure.
4.) Write down what you need to remember.

Tuesday:
SWBAT: Variation in a Species Lesson.
Quick Review: DNA to Protein based on DNA code in flipchart, Signal Transduction Pathway labeled image in flipchart.
Main Lesson: Variation:
1.) Lytic vs. Lysogenic, show with DNA paper models then have students categorize statements.
2.) Sperm Production with coins sheet (independent assortment)
2.) Conjugation, Transformation, Transduction, Random mutation, vocabulary.

Wednesday:
Signal Transduction Intro with 13 cards: Hydrophilic hormone, Membrane Protein, Relay Protein #1, Relay Protein #2, Relay Protein #3, Transcription Factor, RNA polymerase, DNA, mRNA, Ribosome, Protein, Hydrophobic hormone (steroid).
1.) Conjugation, Transformation, Transduction, Random mutation categorization.
2.) Prokaryotic vs. Eukaryotic Venn Diagram from memory in notebook, then add the differences in eukaryotic and prokaryotic DNA to protein.
3.) Change: Concept Activity: Independent Assortment activity. Students complete three columns: Chromosome #, Gamete #1 Mom or Dad's Chromosome, Gamete #2, How many possibilities. Mom
4.) List 6 you had trouble with. Go to others and see theirs and comment about how that one helped you understand more clearly.
5.) Reading other books and placing post it notes in their books about ones that you were confused about.

Monday: Review of DNA Structure and Function Chapters 10-11.
1.) Lac Operon Animation,
2.) Prokaryotic vs. Eukaryotic Transcription and Translation using AP Biology Free Response Question with Venn Diagram. Both: Transcription/Translation, Signal Transduction Pathways, Pro-Lac Operon, Circular DNA, One Chromosome, Euk: Introns/Exons, Hormones from other cells, Alternative Splicing, Post Translational treatments, Enhancers and Silencers, Homeotic Genes
3.) Vocabulary Additions: Enhancers vs. Silencers, Barr Bodies, Alternative Splicing, Homeotic Genes, Dedifferentiation, Prophage,
4.) Cloning on Utah Genetics Website.Vocabulary: Somatic Cell Nuclear Transfer
5.) Gene Activation Role Play
6.) Signal Transduction Pathway
7.) Going through images in Chapter 10-11.

Tuesday: Test

Wednesday: DNA Technology Start
Systemic Thinking About Cancer.

Quick: Whiteboard: Does a dormant cold sore virus look like in a lip cell?

SWBAT: describe and model how DNA is used by humans to manipulate traits.
12.1
- Use Figure 12.1 to build a model that represents what is occurring in this process.
-Create a step by step explanation to answer the question…”How do scientists put useful genes into crops?” and “How do scientists make the proteins (cellulase) necessary to stone-wash jenes?”
-Use the key terms from section 12.1

12.2
-Use Figure 12.2 to build a model that represents what is occurring in this process.
-Create a step by step explanation to answer the question… ”How and why do scientists cut and paste DNA?”
-Use the key terms from section 12.2


Thursday
Go Over Tests?

Vocabulary Chapter 12
SWBAT: Describe applications of DNA technology in evolution and human markets.
Go over Tests,
Clean up DNA models.
12.3
Genomic Library Vocabulary

12.4
-Use Figure 12.4 to build a model that represents what is occurring in this process.
-Create a step by step explanation to answer the question…”How do scientists make DNA for genes that are active in a cell?”
-Use the key terms from section 12.4

Friday:
SWBAT: Describe DNA strategies of PCR and Gel Electrophoresis
How do scientists make copies of DNA so they have a significant number of them.
PCR and Gel Electrophoresis
1.) PCR (Go through steps watch videos)
2.) Gel Electrophoresis (Role play and notes, Utah Interactive)
DNA Profiling
12.11

12.12 PCR, Utah Videos, Write from Memory, Whiteboarding.
How do scientists use molecules as a forensics tool?

12.13 Gel Electrophoresis
Review DNA structure of
Role Play: Hand out Papers with the following 1 kBasepairs (10 total), A positive Paper, and a negative paper, Have students combine using the DNA models and have them "run" a gel. Who goes the furthest? Who goes the shortest?

Utah videos, Repetitive DNA, STRs

Genomics 12.17-12.21 Vocab and discussion: Reading and Outlining

Monday-Friday 12/5-12/9: Cloning a fluorescent Gene Lab Start Geno Week
Monday: PCR and Pipetting.
Tuesday: Ligation
Wednesday: Transformation
Thursday: Plating
Friday: Observations

Evolution 12/12-12/16:
Keys: Evidence Benefits and Drawbacks, Hardy Weinberg Equilibrium.
12/12: Last week whiteboarding and going over sections in chapter 12 that are important. (Everything in lab packet plus...12.1, 12.2, 12.6, 12.7, 12.8, 12.11, 12.12, 12.13, 12.17, 12.18,

12/13: Evolution Vocabulary Chapters 13-15. Chapter 13.4-13.5 Types of Evidence for Evolution: Their positives and negatives.

12/14: Evolution Vocabulary Chapters 13-14

12/15-12/16 Hardy-Weinberg

12/19: Finish Evolution: Final Exam

Wednesday, November 2, 2011

Finishing Inheritance Going to DNA Structure/Function

Thursday 11/3
1.) Introduce Biology Pairs Assignment, Generate List of at least ten biology pairs/opposites.
2.) Making offspring gametes (Sexual or Asexual reproduction, your choice)
3.) Modeling

AP Biology Modeling
Cross I: True-breeding bronze-eyed males were crossed with true-breeding red-eyed females. All the F1 offspring had bronze eyes. F1 flies were crossed, and the data for the resulting F2 flies are given in the table below.

Cross II: True-breeding normal-winged males were crossed with true-breeding stunted-winged females. All the F1 offspring had stunted wings. F1 flies were crossed, and the data for the resulting F2 flies are given in the table
below.

Cross III: True-breeding bronze-eyed, stunted-winged males were crossed with true-breeding red-eyed, normal- winged females. All the F1 offspring had bronze eyes and stunted wings. The F1 flies were crossed with true-
breeding red-eyed, normal-winged flies, and the results are shown in the table below.

PPT's chapter 8 and 9

Friday 11/4
PPT's Chapter 8 and 9
Chi-Squarehttp://www.ndsu.edu/pubweb/~mcclean/plsc431/mendel/mendel4.htm Going back to last Friday's worksheet.
1.) DNA Replication race the right way. 5' to 3' DNA Helicase, DNA Polymerase, DNA ligase, Okazaki Fragments,
2.) DNA Replication races

Monday 11/7
Test
Hershey Chase Experiment, Pneumonia Experiment

Tuesday 11/8
Go over all tests
1.) DNA Experiments worksheet with predicted results vs. actual results.
Hershey Chase Experiment, Pneumonia Experiment

Wednesday 11/9
DNA Corrections
1.) Start going through vocabulary.
2.) Replication vocabulary first, protein production second
3.) RNA vs DNA homework chart.

Thursday 11/10
1.) Clean up DNA Models.
2.) Review Protein Structure and Function, DNA Structure and Function.
3.) Vocabulary List: Transcription, Translation,

Friday 11/12
Continue Hershey Chase experiment. Meselson-Stahl Experiment Explanation.
1.) Finish vocabulary
2.) Replication detail
3.) Transcription detail
4.) Translation detail.
5.) Hershey Chase Experiment Worksheet.
6.) Vocabulary Continue

Monday
-Exon/Intron Hook
1.) Continue Notes on Translation (elongation)-Advance Detail Videos, ppt slides from Chapter 10.10-10.15
2.) Transcription/Translation Utah Genetics for Speed.
3.) Utah Genetics Protein Mutations
4.) Translation Vocabulary

Tuesday:
View DNA to mRNA to Protein as a system of production.

Transcriptional Level:
-Histones binding and suppressing DNA
-No polymerase binding to that section of the DNA
-Other suppressor proteins not allowing RNA polymerase to bind to the DNA
-Lick a Rat

mRNA Level:
-Lacking a stabilizer
-Breaks down easily
-Splicing (take out introns leave in introns)

Translational Level:
-Protein being unstable
-Protein needing an extra treatment (adding a phosphate)

1.) Review replication draw and describe from memory, transcription draw from memory, translation draw from memory.
2.) Combine with two other people.
3.) Whoever had the least details in their first picture does the oral description.
4.) Lytic vs. Lysogenic Vocabulary

Lac Operon?
Meselson-Stahl Experiment and whiteboarding.
-Molecular Workshop, transcription, translation, protein folding.

Wednesday: DNA to protein from memory.
-Describing DNA to protein on a whiteboard include regulation steps.
-Whiteboarding: Cold Sore Viruses: How do they work?
-Bacteria and Virus Vocabulary, ppt. images rest of Chapter 10.

Thursday:
Khan Bacteria and Virus Video

Friday:
Video

Monday:
Review Protein Structure and Function
Transcription vs. Translation vs. Replication
Virus vs. Bacteria, Lytic vs. Lysogenic

Tuesday:
Variation in a Species Lesson:
1.) Sperm Production with coins sheet (independent assortment)
2.) Conjugation, Transformation, Transduction, Random mutation.

Wednesday:
Chapter 10 and Regulation Quiz, Post-it notes on other people's books.